Terminology publications: Difference between revisions

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==Peer Reviewed Articles==
==Peer Reviewed Articles==
*Volmer, D. A. Terms and acronyms that should be avoided in mass spectrometry publications. 'Rapid Commun. Mass Spectrom.' 2014, ''28'' (17), 1853-1854, Editorial. DOI: {{doi}}10.1002/rcm.6979.
*Shard, A. G.; Baer, D. R.; Clifford, C. A. Importance of standard terminology in surface chemical analysis: ISO 18115‐1:2023, general terms and terms used in spectroscopy. Surface and Interface Analysis 2024, 56 (5), 305-307. {{doi}}10.1002/sia.7284
*Coplen, T. B. Guidelines and recommended terms for expression of stable-isotope-ratio and gas-ratio measurement results. 'Rapid Commun. Mass Spectrom.' 2011, ''25'' (17), 2538-2560. DOI: {{doi}}10.1002/rcm.5129.
*Pereverzev, A; Roithova, J. Experimental techniques and terminology in gas-phase ion spectroscopy, J. Mass Spectrom., 2922, 57, e4826. {{doi}}10.1002/jms.4826
*Murray, K. K. Glossary of terms for separations coupled to mass spectrometry. 'J. Chromatogr. A' 2010, ''1217'' (25), 3922-3928. DOI: {{doi}10.1016/j.chroma.2010.03.013.
*Murray, K. K. Resolution and Resolving Power in Mass Spectrometry. J. Am. Soc. Mass. Spectrom. 2022.  {{doi}}10.1021/jasms.2c00216  See also[https://kermitmurray.com/research/2022/06/asms-2022-resolution-and-resolving-power-terminology-in-mass-spectrometry/]
*Brenton, A. G.; Godfrey, A. R. Accurate Mass Measurement: Terminology and Treatment of Data. 'J. Am. Soc. Mass Spectrom.' 2010, ''21'' (11), 1821-1835. DOI: {{doi}}10.1016/j.jasms.2010.06.006.
*Murray, K. K. In defense of the quasimolecular ion. J. Mass Spectrom. 2021, 56 (2), e4700.  {{doi}}10.1002/jms.4700.
*Lermyte, F.; Tsybin, Y. O.; O'Connor, P. B.; Loo, J. A. Top or Middle? Up or Down? Toward a Standard Lexicon for Protein Top-Down and Allied Mass Spectrometry Approaches. J. Am. Soc. Mass. Spectrom. 2019, 30 (7), 1149-1157. {{doi}}10.1007/s13361-019-02201-x.
*Pauling, J. K.; Hermansson, M.; Hartler, J.; Christiansen, K.; Gallego, S. F.; Peng, B.; Ahrends, R.; Ejsing, C. S. Proposal for a common nomenclature for fragment ions in mass spectra of lipids. PLoS One 2017, 12 (11), e0188394.  {{doi}}10.1371/journal.pone.0188394
*Murray, K. K. Comment on: "Nominal Mass?" by Athula B. Attygalle and Julius Pavlov, J. Am. Soc. Mass Spectrom. 28, 1737-1738 (2017). J. Am. Soc. Mass Spectrom. 2017, 28 (12), 1737-1732.  {{doi}}10.1007/s13361-017-1801-1.
*Attygalle, A. B.; Pavlov, J. Nominal Mass? J. Am. Soc. Mass. Spectrom. 2017, 28 (8), 1737-1738, Letter.  {{doi}}10.1007/s13361-017-1647-6
*Pourshahian, S. Mass Defect from Nuclear Physics to Mass Spectral Analysis. J. Am. Soc. Mass. Spectrom. 2017, 28 (9), 1836-1843. {{doi}}10.1007/s13361-017-1741-9 
*Volmer, D. A. Terms and acronyms that should be avoided in mass spectrometry publications. 'Rapid Commun. Mass Spectrom.' 2014, ''28'' (17), 1853-1854, Editorial. {{doi}}10.1002/rcm.6979.
*Urban, J.; Afseth, N. K.; tys, D. Fundamental definitions and confusions in mass spectrometry about mass assignment, centroiding and resolution. TrAC, Trends Anal. Chem. 2014, 53, 126-136. {{doi}}10.1016/j.trac.2013.07.010.
*Liebisch, G.; Vizcaino, J. A.; Kofeler, H.; Trotzmuller, M.; Griffiths, W. J.; Schmitz, G.; Spener, F.; Wakelam, M. J. O. Shorthand notation for lipid structures derived from mass spectrometry. J. Lipid Res. 2013, 54 (6), 1523-1530. {{doi}}10.1194/jlr.M033506.
*Murray, K. K.; Boyd, R. K.; Eberlin, M. N.; Langley, G. J.; Li, L.; Naito, Y. Definitions of terms relating to mass spectrometry (IUPAC Recommendations 2013). 'Pure. Appl. Chem.' 2013, ''85'' (7), 1515-1609.  {{doi}}10.1351/PAC-REC-06-04-06.
*Flenker, U. Isotope ratio mass spectrometry - history and terminology in brief. Drug Test Anal 2012, 4 (12), 893-896. {{doi}}10.1002/dta.1399.
*Coplen, T. B. Guidelines and recommended terms for expression of stable-isotope-ratio and gas-ratio measurement results. 'Rapid Commun. Mass Spectrom.' 2011, ''25'' (17), 2538-2560. {{doi}}10.1002/rcm.5129.
*Murray, K. K. Glossary of terms for separations coupled to mass spectrometry. 'J. Chromatogr. A' 2010, ''1217'' (25), 3922-3928. {{doi}}10.1016/j.chroma.2010.03.013.
*Brenton, A. G.; Godfrey, A. R. Accurate Mass Measurement: Terminology and Treatment of Data. 'J. Am. Soc. Mass Spectrom.' 2010, ''21'' (11), 1821-1835. {{doi}}10.1016/j.jasms.2010.06.006.
*Zubarev, R.; Mann, M. On the proper use of mass accuracy in proteomics. Mol. Cell. Proteomics 2007, 6 (3), 377-381.  {{doi}}10.1074/mcp.M600380-MCP200.
*Boggess, B. Mass Spectrometry Desk Reference (Sparkman, O. David). J. Chem. Educ. 2001, 78 (2), 68.  {{doi}}10.1021/ed078p168.2.
*Todd, J. F. J. Recommendations for nomenclature and symbolism for mass spectroscopy. 'Int. J. Mass. Spectrom. Ion Processes' 1995, ''142'' (3), 209-240.
*Todd, J. F. J. Recommendations for nomenclature and symbolism for mass spectroscopy. 'Int. J. Mass. Spectrom. Ion Processes' 1995, ''142'' (3), 209-240.
*Todd, J. F. J. Recommendations for Nomenclature and Symbolism for Mass-Spectroscopy (Including an Appendix of Terms Used in Vacuum Technology) - (IUPAC Recommendations 1991). 'Pure. Appl. Chem.' 1991, ''63'' (10), 1541-1566. DOI: {{doi}}10.1351/pac199163101541.
*Todd, J. F. J. Recommendations for Nomenclature and Symbolism for Mass-Spectroscopy (Including an Appendix of Terms Used in Vacuum Technology) - (IUPAC Recommendations 1991). 'Pure. Appl. Chem.' 1991, ''63'' (10), 1541-1566. {{doi}}10.1351/pac199163101541.
*Price, P. Standard definitions of terms relating to mass spectrometry. 'J. Am. Soc. Mass Spectrom.' 1991, 2 (4), 336-348. DOI: {{doi}}10.1016/1044-0305(91)80025-3.
*Price, P. Standard definitions of terms relating to mass spectrometry. 'J. Am. Soc. Mass Spectrom.' 1991, 2 (4), 336-348. {{doi}}10.1016/1044-0305(91)80025-3. Also see [[ASMS 1997 Terms and Definitions Poster]]
*Beynon, J. H. Recommendations for Symbolism and Nomenclature for Mass Spectroscopy. Pure Appl. Chem. 1978, 50 (1), 65-74. DOI: {{doi}}10.1351/pac197850010065.
*Duckworth, H. E.; Nier, A. O. Evolution of the unified scale of atomic mass, 12C = 12u. Int. J. Mass Spectrom. Ion Processes 1988, 86, 1-19.  {{doi}}10.1016/0168-1176(88)80051-x.
*Roepstorff, P.; Fohlman, J. Proposal for a common nomenclature for sequence ions in mass spectra of peptides. 'Biomed. Mass Spectrom.' 1984, ''11'' (11), 601.  {{doi}}10.1002/bms.1200111109 
*Beynon, J. H. Recommendations for Symbolism and Nomenclature for Mass Spectroscopy. Pure Appl. Chem. 1978, 50 (1), 65-74. {{doi}}10.1351/pac197850010065.
*Meyerson, S. Letter: Definitions and terms in mass spectrometry. A progress report from ASTM Committee E-14 Subcommittee 10. Biomed. Mass Spectrom. 1975, 2 (1), 59-62.  {{doi}}10.1002/bms.1200020111 
*Robertson, A. Recommendations for Nomenclature of Mass Spectrometry. Pure Appl. Chem. 1974, 37 (4), 469-480.  {{doi}}10.1351/pac197437040469.
*Preliminary Recommendations on Nomenclature and Presentation of Data in Gas Chromatography. 'Pure Appl. Chem.' 1960, ''1'' (1), 177-186.  {{doi}}10.1351/pac196001010177.


==Books==
==Terminology Books==
*[[Orange Book]]
*{{Book
*[[Gold Book]]
|title=Compendium of Analytical Nomenclature (Orange Book)
*[[Mass Spec Desk Reference]]
|link=Orange Book
|author=D Brynn Hibbert, ed.
|year=2023
|publisher=Royal Society of Chemistry
|isbn=978-1-78262-947-4
}}
*{{Book
|title=Compendium of Chemical Terminology (IUPAC Chemical Data) 2nd Edition (Gold Book)
|link=Gold Book
|author=Alan D. McNaught, Andrew Wilkinson, Aubrey Dennis Jenkins,
|year=2006
|publisher=International Union of Pure and Applied Chemistry
|isbn=978-0865426849
}}
*{{Book
|title=Quantities, Units and Symbols in Physical Chemistry (Green Book)
|link=Green Book
|author=Terry Renner
|editor=E Richard Cohen; Tom Cvitas; Jeremy G Frey; Bertil Holstrm; Kozo Kuchitsu; Roberto Marquardt; Ian Mills; Franco Pavese; Martin Quack; Jergen Stohner; Herbert L Strauss; Michio Takami; Anders J Thor
|year=2007
|publisher=Royal Society of Chemistry
|isbn=978-0-85404-433-7
}}
*{{Book
|title=Mass Spec Desk Reference
|link=Mass Spec Desk Reference
|author=O. David Sparkman
|editor=
|year=2000
|publisher=Global View
|isbn=978-0966081329
}}
*{{Book
|title=Mass Spectrometry Desk Reference
|link=Mass Spec Desk Reference
|author=O. David Sparkman
|editor=
|year=2006
|publisher=Global View
|isbn=978-0966081398
}}
*{{Book
|title=Dictionary of Mass Spectrometry
|link=Dictionary of Mass Spectrometry 2010
|author=Anthony I. Mallet, Steve Down
|year=2010
|publisher=Wiley
|isbn=978-0-470-02761-5
}}
 
==Classic Books==
*{{Book
|title=Electricity and Matter
|link=Thomson 1904
|author=[[wikipedia:J. J. Thompson|Joseph John Thomson]]
|year=1904
|publisher=Scribner
|isbn=978-1603867511
}}[https://archive.org/details/electricitymatte00thomiala/page/n7/mode/2up]
*{{Book
|title=Isotopes
|link=Aston 1922
|author=[[wikipedia:F. W. Aston|Francis William Aston]]
|year=1922
|publisher=Edward Arnold
|isbn=978-1016732383
}}
*{{Book
|title=Rays of Positive Electricity and Their Application to Chemical Analyses
|link=Rays of Positive Electricity and Their Application to Chemical Analyses
|author=[[wikipedia:J. J. Thompson|Joseph John Thomson]]
|year=1913
|publisher=Longmans Green
|isbn=978-0548666852
}}


==Websites==
==Websites==
*Cornell [https://research.weill.cornell.edu/core-facilities/advanced-biomolecular-analysis-core-abac/ms-terms-and-definitions Mass Spectrometry Terms and Definitions]
*Cornell [https://research.weill.cornell.edu/core-facilities/advanced-biomolecular-analysis-core-abac/ms-terms-and-definitions Mass Spectrometry Terms and Definitions]
*LCGC [https://www.chromatographyonline.com/view/mass-spectrometry-glossary A Mass Spectrometry Glossary]
*University of Münster [https://www.uni-muenster.de/Chemie.oc/en/ms/lexikon.html Mass Spec Terms]
*UC Riverside [https://www.cs.ucr.edu/~mingxunw/terminology/ Mass Spec Terminology]
*Wiley Analytical Science [https://analyticalscience.wiley.com/content/article-do/mass-spectrometry-glossary-terms Mass Spectrometry Glossary of Terms]
*Wiley Analytical Science [https://analyticalscience.wiley.com/content/article-do/mass-spectrometry-glossary-terms Mass Spectrometry Glossary of Terms]
==Presentations==
*[[ASMS 1974|ASMS 1974: Definitions and Terms in Mass Spectrometry]]
*[[ASMS 1982|ASMS 1982: Nomenclature Committee Workshop]]
*[[ASMS 1997 Terms and Definitions Poster]]
*[https://kermitmurray.com/research/2007/06/mass-spectrometry-on-wikipedia-open-source-and-peer-review/asms_2007_wiki_poster/ ASMS 2007: Mass Spectrometry on Wikipedia: Open Source and Peer Review]
*[https://kermitmurray.com/research/2009/06/is-wikipedia-the-public-face-of-mass-spectrometry/asms_wikipedia_poster_2009/ ASMS 2009: Is Wikipedia the Public Face of Mass Spectrometry?]
*[https://kermitmurray.com/research/2013/06/final-report-on-the-iupac-recommendation-on-definitions-of-terms-relating-to-mass-spectrometry/ ASMS 2013: Final Report on the IUPAC Recommendation on Definitions of Terms Relating To Mass Spectrometry]
*[https://player.vimeo.com/video/226778317 ASMS 2017: MALDI Past and Future]
*[https://kermitmurray.com/research/2022/06/asms-2022-resolution-and-resolving-power-terminology-in-mass-spectrometry/ ASMS 2022: Resolution and Resolving Power Terminology in Mass Spectrometry]
*[https://kermitmurray.com/research/2023/05/asms-2023-social-media-for-mass-spectrometry/ ASMS 2023: Social Media for Mass Spectrometry]
[[Category:Reference]]
[[Category:Mass spectrometry terms]]

Latest revision as of 09:34, 10 July 2025

Peer Reviewed Articles

Terminology Books

Classic Books

Websites

Presentations

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