RSS:Proteomics

Proteomics

RSS

RSS Feed

A Proteomics Resource Investigating Fibrosis: Proof‐of‐Concept for Identifying Novel Drug Candidates

PROTEOMICS, EarlyView.

— Hanne Devos, Manousos Makridakis, Rafael Stroggilos, Mayra Alejandra Jaimes Campos, Aggeliki Tserga, Marika Mokou, Maria G. Roubelakis, Jerome Zoidakis, Antonia Vlahou, Agnieszka Latosinska 2025-12-12 13:29:11

Advancing Understanding of the Protein Composition of Human Seminal Extracellular Vesicles

PROTEOMICS, EarlyView.

— Cottrell T. Tamessar, Shanmathi Parameswaran, Elizabeth Torres‐Arce, Judith Weidenhofer, Hui‐Ming Zhang, Jess E. Mulhall, Sarah A. Robertson, Elizabeth G. Bromfield, Brett Nixon, David J. Sharkey, David A. Skerrett‐Byrne, John E. Schjenken 2025-12-12 13:24:04

Proteomics Advances in Immunology and Infection Research

PROTEOMICS, EarlyView.

— Aleksandra Nita‐Lazar 2025-12-10 19:04:34

Probing Early α‐Synuclein Oligomers: Insights Into Aggregation Pathways of NACore and preNAC Segments Probed by Trapped Ion‐Mobility Mass Spectrometry and Fluorescence Spectroscopy

PROTEOMICS, EarlyView.

— Agathe Depraz Depland, Stephanie Mikromanolis, Iuliia Stroganova, Anouk M. Rijs 2025-12-10 10:46:45

High‐Resolution Ion Mobility as an Alternative to Quadrupole‐Based Precursor Isolation for Reducing Chimeric Fragmentation Spectra in Bottom‐Up Proteomics

PROTEOMICS, EarlyView.

— Isabel R. Uribe, Liulin Deng, Leonard Rorrer III, Lauren Royer, Miriam Fico, Daniel DeBord 2025-12-05 14:09:07

Mass Spectrometry‐Based Quantification of Proteins and Post‐Translational Modifications in Dried Blood: Longitudinal Sampling of Patients With Sepsis in Tanzania

PROTEOMICS, EarlyView.

— Matthew W. Foster, Timothy J. McMahon, James S. Ngocho, Asia H. Kipengele, Marlene Violette, Youwei Chen, Deng B. Madut, Robert S. Plumb, A. lan Wong, Lingye Chen, Grace M. Lee, Philoteus A. Sakasaka, Blandina T. Mmbaga, John A. Crump, Micah T. McClain, Christopher W. Woods, Venance P. Maro, Matthew P. Rubach 2025-12-03 14:10:59

Metabolic Profiling of the EmDia Cohort by LC‐MS Reveals Empagliflozin‐Intake Associated Regulation of 1,5‐anhydroglucitol and Urate

PROTEOMICS, EarlyView.

— Fabian Schmitt, Vincent ten Cate, Zlatka Fischer, Mathias Hagen, Barbara A. Steigenberger, Stefan Tenzer, Philipp S. Wild, Thierry Schmidlin 2025-12-03 11:49:17

Elenbecestat and Compound 89 Potently Inhibit BACE1 but Not BACE2 When Subchronically Dosed in Non‐Human Primates

PROTEOMICS, EarlyView.

— Sarah K. Tschirner, Andree Schmidt, Mana Ito, Kana Hyakkoku, Akimasa Yoshimura, Stephan A. Müller, Naotaka Horiguchi, Stefan F. Lichtenthaler 2025-11-27 17:43:23

Issue Information: Proteomics 21–22'25

PROTEOMICS, Volume 25, Issue 21-22, Page 1-5, November 2025.

2025-11-25 13:04:56

Expanding the Reach of Membrane Protein–Ligand Interaction Studies Through the Integration of Mass Spectrometry and Membrane Mimetics

PROTEOMICS, Volume 25, Issue 21-22, Page 25-40, November 2025.

— Jonathon C. Lambos, Ashim Bhattacharya, Mohammed Al‐Seragi, Franck Duong van Hoa 2025-11-25 13:04:56

Glycoproteomics and Its Role in Understanding Bacterial O‐Linked Glycosylation

PROTEOMICS, Volume 25, Issue 21-22, Page 160-176, November 2025.

— Kristian I. Karlic, Hamza Tahir, Nichollas E. Scott 2025-11-25 13:04:56

Proteomic Insight Into Alzheimer's Disease Pathogenesis Pathways

PROTEOMICS, Volume 25, Issue 21-22, Page 214-229, November 2025.

— Taekyung Ryu, Kyungdo Kim, Nicholas Asiimwe, Chan Hyun Na 2025-11-25 13:04:56

Computational Approaches for Pathway‐Centric Analysis of Protein Post‐Translational Modifications

PROTEOMICS, Volume 25, Issue 21-22, Page 41-61, November 2025.

— Julian Müller, Bernhard Kuster, Matthew The 2025-11-25 13:04:56

Data Processing and Analysis in Positional Proteomics

PROTEOMICS, Volume 25, Issue 21-22, Page 277-293, November 2025.

— Aleksander Moldt Haack, Konstantinos Kalogeropoulos 2025-11-25 13:04:56

Sample Preparation for Multi‐Omics Analysis: Considerations and Guidance for Identifying the Ideal Workflow

PROTEOMICS, Volume 25, Issue 21-22, Page 76-101, November 2025.

— Breyer Woodland, Luke A. Farrell, Lana Brockbals, Maria Rezcallah, Aiden Brennan, Emily J. Sunnucks, Sam T. Gould, Aleksandra M. Stanczak, Matthew B. O'Rourke, Matthew P. Padula 2025-11-25 13:04:56

Key Considerations on CITE‐Seq for Single‐Cell Multiomics

PROTEOMICS, Volume 25, Issue 21-22, Page 206-213, November 2025.

— Hye‐Wong Song, Jody Martin, Xiaoshan Shi, Aaron J. Tyznik 2025-11-25 13:04:56

Key Regulators of Parasite Biology Viewed Through a Post‐Translational Modification Repertoire

PROTEOMICS, Volume 25, Issue 21-22, Page 253-276, November 2025.

— Naiwen Zhang, Ning Jiang, Qijun Chen 2025-11-25 13:04:56

Advances in Spatial Multi‐Omics: A Review of Multi‐Modal Mass Spectrometry Imaging and Laser Capture Microdissection‐LCMS Integration

PROTEOMICS, Volume 25, Issue 21-22, Page 151-159, November 2025.

— Jessica K. Lukowski, Byoung‐Kyu Cho, Antonia Zamacona Calderon, Borna Dianati, Katherine Stumpo, Savannah Snyder, Young Ah Goo 2025-11-25 13:04:56

Chemical Proteomics Probes: Classification, Applications, and Future Perspectives in Proteome‐Wide Studies

PROTEOMICS, Volume 25, Issue 21-22, Page 62-75, November 2025.

— Xiaoyue Tan, Dan Wang, Yingrui Yao, Kaixuan Liu, Yuzhou Chen, Songsen Fu, Feng Ni 2025-11-25 13:04:56

Mining Alzheimer's Interactomes, Macromolecular Complexes and Pathways for Drug Discovery

PROTEOMICS, Volume 25, Issue 21-22, Page 102-150, November 2025.

— Kalpana Panneerselvam, Krishna Kumar Tiwari, Luana Licata, Simona Panni, Sylvie Ricard‐Blum, Sucharitha Balu, Susie Huget, Juan Jose Medina Reyes, Eliot Ragueneau, Livia Perfetto, Birgit Meldal, Sandra Orchard, Henning Hermjakob 2025-11-25 13:04:56

Proteomics Insights Into Lysosome Biogenesis and Maturation

PROTEOMICS, Volume 25, Issue 21-22, Page 6-24, November 2025.

— Katharina Hirn, Sofía Fajardo‐Callejón, Dominic Winter 2025-11-25 13:04:56

A Review of Retention Time Alignment Methods and Tools for Proteomics Data

PROTEOMICS, Volume 25, Issue 21-22, Page 177-184, November 2025.

— Yi Liu, Kaikun Xu, Cheng Chang 2025-11-25 13:04:56

Insights on Wet and Dry Workflows for Human Gut Metaproteomics

PROTEOMICS, Volume 25, Issue 21-22, Page 230-252, November 2025.

— Valeria Marzano, Stefano Levi Mortera, Lorenza Putignani 2025-11-25 13:04:56

Comparative Proteomics of Salinity Stress Responses in Fish and Aquatic Invertebrates

PROTEOMICS, Volume 25, Issue 21-22, Page 185-205, November 2025.

— Maxime Leprêtre, Jens Hamar, Monica B. Urias, Dietmar Kültz 2025-11-25 13:04:56

Urinary Peptidomic Profiling In Post‐Acute Sequelae of SARS‐CoV‐2 Infection: A Case‐Control Study

PROTEOMICS, EarlyView.

— Dilara Gülmez, Justyna Siwy, Katharina Kurz, Ralph Wendt, Miroslaw Banasik, Björn Peters, Emmanuel Dudoignon, Francois Depret, Mercedes Salgueira, Elena Nowacki, Amelie Kurnikowski, Sebastian Mussnig, Simon Krenn, Samuel Gonos, Judith Löffler‐Ragg, Günter Weiss, Harald Mischak, Manfred Hecking, Eva Schernhammer, Joachim Beige, UriCoV Working Group 2025-11-21 19:43:27

Plasma Extraction by Acetonitrile and Trichloroacetic Acid With Dithiothreitol and Combination for Low Molecular Weight Proteome Analysis

PROTEOMICS, EarlyView.

— Ting Liu, Shenjian Xu, Chengzhuo Chu, Kun Jiang, Jiaojiao Sha, Liangjia Du, Dezhu Chen, Minqi Cai, Yiqiang Chen, Bing Bai 2025-11-21 19:42:59

Proteomics of Prostate Cancer Tissue Small Extracellular Vesicles Reveal Alteration of Metabolism

PROTEOMICS, EarlyView.

— Lijuan Yu, Ting Ding, Roger Olofsson Bagge, Lei Zheng, Xiaoke Hao 2025-11-17 09:02:30

Orthodox vs. Paradox: Supporting the Central Dogma With Sugar Code

PROTEOMICS, EarlyView.

— Weijie Cao, Fangli Hu, Yueyang Li, Wei Wang 2025-11-17 20:17:37

Proteoform Mapping Calls for a Combined Effort From Bottom‐Up and Top‐Down Proteomics

PROTEOMICS, EarlyView.

— Yuri E. M. van der Burgt 2025-11-11 19:52:55

Proteomic Profiling of Myofiber Repair Annexins and Their Role in Duchenne Muscular Dystrophy

PROTEOMICS, EarlyView.

— Paul Dowling, Dounia Bouragba, Elisa Negroni, Capucine Trollet, Margit Zweyer, Dieter Swandulla, Kay Ohlendieck 2025-11-11 13:23:57

See the Unseen: Rapid, Multiparametric Single‐Particle Analysis of Extracellular Vesicles With Nano‐Flow Cytometry

PROTEOMICS, EarlyView.

— Yunyun Hu, Qiujin Wu, Junyan Chen, Xin Chen, Haonan Di, Xiaomei Yan 2025-11-10 19:53:26

Microglia Display Altered Spatial Morphology and Proteome After Stroke

PROTEOMICS, EarlyView.

— Brooke J. Wanrooy, Jenny L. Wilson, Althea R. Suthya, Joshua H. Bourne, Joel R. Steele, Hossein Valipour Kahrood, Ralf B. Schittenhelm, Giulia Ballerin, Cameron Skinner, Shu Wen Wen, Connie H. Y. Wong 2025-11-10 10:26:45

Top‐Down Proteomics and Proteoforms—The Train Speeds Up!

PROTEOMICS, EarlyView.

— Philipp T. Kaulich, Hartmut Schlüter, Andreas Tholey 2025-11-10 10:26:24

Advancing Extracellular Vesicle Research: A Review of Systems Biology and Multiomics Perspectives

PROTEOMICS, EarlyView.

— Gloria Kemunto, Samaneh Ghadami, Kristen Dellinger 2025-11-10 20:19:22

Comparative Analysis of Proteoform Clean‐Up Methods for In‐Depth Top‐Down Proteomics

PROTEOMICS, EarlyView.

— Alyssa A. Williams, Kendalyn N. Firenza, Amy K. Carfagno, Jake T. Kline, Luca Fornelli 2025-11-10 20:04:10

Lyophilization Improved Efficiency in 2‐in‐1 Metabolite and Protein Extraction for Plant Multi‐Omics

PROTEOMICS, EarlyView.

— Qijie Guan, Tahmina Akter, Yatendra Singh, Bowen Tan, Sixue Chen 2025-11-03 19:02:10

OmixLitMiner 2: Guided Literature Mining for Automated Categorization of Marker Candidates in Omics Studies

PROTEOMICS, EarlyView.

— Antonia Gocke, Bente Siebels, Jelena Navolić, Carla Reinbold, Julia E. Neumann, Stefan Kurtz, Hartmut Schlüter 2025-11-02 19:37:54

Reproductive Aging Impacts the Seminal Fluid Proteome in the Yellow Fever Mosquito, Aedes aegypti

PROTEOMICS, EarlyView.

— Sara V. Villa‐Arias, Jessica O. Atehortúa, Steve Dorus, Frank W. Avila, Catalina Alfonso‐Parra 2025-11-02 19:36:52

Multi‐Omics Assessment of Primed Tissue‐Specific MSCs‐sEV to Unveil Their Regenerative Potential

PROTEOMICS, EarlyView.

— Yashvi Sharma, Rama N. Behera, Naina Soni, Kiran Ambatipudi, Rashmi Rameshwari, Sabyasachi Bandyopadhyay, Sujata Mohanty 2025-10-21 16:38:25

Methionine Oxidation Footprinting in Intact Proteins (MOFIP) Using Top‐Down Proteomics

PROTEOMICS, EarlyView.

— Anju Teresa Sunny, Kellye A. Cupp‐Sutton, Zhitao Zhao, Trishika Chowdhury, Yanting Guo, Si Wu 2025-10-20 17:06:38

Proteomic Changes in Cancer Cell Lines as a Result of Bacterial Infection

PROTEOMICS, EarlyView.

— Bo Ren, Kenneth Weke, Darryl Hardie, Mariya I. Goncheva, Ted Hupp, Javier Antonio Alfaro, Helena Pětrošová, David R. Goodlett 2025-10-20 15:51:55

Isolation and Characterization of Extracellular Vesicles From Ascochyta rabiei, a Necrotrophic Fungal Chickpea Pathogen

PROTEOMICS, EarlyView.

— Matin Ghaheri, Chamindie Punyadeera, Ido Bar, Prabhakaran T. Sambasivam, Abolfazl Jangholi, Donovan Garcia‐Ceron, Muhammad J. A. Shiddiky, Rebecca Ford 2025-10-20 19:00:00

Migrasomes, Matrix‐Bound Nanovesicles, and More: Messengers in the Matrix

PROTEOMICS, EarlyView.

— Anna V. Kolesov, Natalie Reitz, Marley Dewey, Colin L. Hisey 2025-10-14 18:52:32

Differential Proteomics of Large Extracellular Vesicles in Ovarian Cancer

PROTEOMICS, EarlyView.

— Kazuhiro Suzuki, Yusuke Yamamoto, Masami Kitagawa, Eri Asano‐Inami, Kosuke Yoshida, Hiroaki Kajiyama, Akira Yokoi 2025-10-02 17:37:40

Oncogenic H‐Ras Reprograms Madin‐Darby Canine Kidney (MDCK) Cell‐Derived Midbody Remnant Proteome Following Epithelial‐Mesenchymal Transition

PROTEOMICS, EarlyView.

— Adnan Shafiq, Alin Rai, Rong Xu, Maoshan Chen, Wittaya Suwakulsiri, David W. Greening, Richard J. Simpson 2025-10-01 08:46:04

Characterization of Cytokine Treatment on Human Pancreatic Islets by Top‐Down Proteomics

PROTEOMICS, EarlyView.

— Ashley N. Ives, Tyler J. Sagendorf, Lorenz Nierves, Tai‐Tu Lin, Ercument Dirice, Rohit N. Kulkarni, Ljiljana Paša‐Tolić, Wei‐Jun Qian, James M. Fulcher 2025-09-21 18:32:58

FLASHApp: Interactive Data Analysis and Visualization for Top‐Down Proteomics

PROTEOMICS, EarlyView.

— Tom David Müller, Jihyung Kim, Andrew Almaguer, Ayesha Feroz, Jaekwan Kim, Axel Walter, Wonhyeuk Jung, Oliver Kohlbacher, Kyowon Jeong 2025-09-21 18:24:48

Challenges and Opportunities in State‐of‐the‐Art Proteomics Analysis for Biomarker Development From Plasma Extracellular Vesicles

PROTEOMICS, EarlyView.

— Panshak P. Dakup, Ivo Diaz Ludovico, Youngki You, Chaitra Rao, Javier Flores, Lisa M. Bramer, Marian Rewers, Bobbie‐Jo M. Webb‐Robertson, Thomas O. Metz, Raghavendra G. Mirmira, Emily K. Sims, Ernesto S. Nakayasu 2025-09-16 09:45:18

Deconvolution Methods to Link Multi‐Omics Data to Cell Type‐Specific Extracellular Vesicle Abundances

PROTEOMICS, EarlyView.

— Iben Skov Jensen, Jannik Hjortshøj Larsen, Per Svenningsen 2025-09-15 13:05:55

Coupling CZE, Liquid‐Phase Ion Mobility, to MS/MS for Quantitative Top‐Down Proteomics: Revealing Significant Proteoform Differences Between Healthy and Alzheimer's Disease Brains

PROTEOMICS, EarlyView.

— Mehrdad Falamarzi Askarani, Fei Fang, Scott E. Counts, Liangliang Sun 2025-09-14 17:38:29

Omics Insights Into the Effects of Highbush Blueberry and Cranberry Crop Agroecosystems on Honey Bee Health and Physiology

PROTEOMICS, EarlyView.

— Huan Zhong, Yuming Shi, Aleksandra Kozlova, Renata Moravcova, Jason C. Rogalski, Aidan Jamieson, Lance Lansing, Kyung‐Mee Moon, Xiaojing Yuan, Amanda S. Gregoris, Heather Higo, Julia Common, Ida M. Conflitti, Mateus Pepinelli, Lan Tran, Morgan Cunningham, Hosna Jabbari, Syed Abbas Bukhari, Sarah K. French, Rodrigo Ortega Polo, Shelley E. Hoover, Stephen F. Pernal, Pierre Giovenazzo, M. Marta Guarna, Amro Zayed, Leonard J. Foster 2025-09-06 19:00:00

Nigericin‐Triggered Phosphodynamics in Inflammasome Formation and Pyroptosis

PROTEOMICS, EarlyView.

— Vanya Bhushan, Clinton J. Bradfield, Sandhini Saha, Sung Hwan Yoon, Iain D. C. Fraser, Aleksandra Nita‐Lazar 2025-09-02 19:00:00

TDEase: An Open‐Source Data Visualization Software Framework for Targeted Proteoform Characterization by Top‐Down Proteomics

PROTEOMICS, EarlyView.

— Yucheng Liao, Rui Qian, Mengting Zhang, Chenghao Sun, Han Wen, Weinan E, Weijie Zhang, Mowei Zhou 2025-08-29 11:30:39

Enhancing Lipidomics With High‐Resolution Ion Mobility‐Mass Spectrometry

PROTEOMICS, EarlyView.

— Gaoyuan Lu, Shuling Xu, Penghsuan Huang, Lingjun Li 2025-08-13 12:05:07

Revealing the Heterogeneity of Extracellular Vesicles: From Population to Single Particle Level

PROTEOMICS, EarlyView.

— Aixiang Bu, Guangyao Wu, Lianghai Hu 2025-08-05 08:04:39

Proteoform Identification Using Multiplexed Top‐Down Mass Spectra

PROTEOMICS, EarlyView.

— Zhige Wang, Xingzhao Xiong, Xiaowen Liu 2025-07-30 16:50:50

Enhanced Separation of Intact Proteins and Proteoforms by CZE‐MS Using Sulfobetaine‐Modified Poly(α‐L‐lysine)‐Based Multilayer Coatings for EOF Adjustment

PROTEOMICS, EarlyView.

— Alisa Höchsmann, Henry Frick, Laura Dhellemmes, Laurent Leclercq, Philipp T. Kaulich, Andreas Tholey, Hervé Cottet, Norbert Schaschke, Christian Neusüß 2025-07-25 19:00:00

Top‐Down Proteomics: Why and When?

PROTEOMICS, EarlyView.

— Philipp T. Kaulich, Andreas Tholey 2025-04-27 17:28:53

Quantitative Top–Down Proteomics Reveals Significant Differences in Histone Proteoforms Between Metastatic and Nonmetastatic Colorectal Cancer Cells

PROTEOMICS, EarlyView.

— Fei Fang, Brian Fries, Zhige Wang, Xiaowen Liu, Amanda B. Hummon, Liangliang Sun 2025-04-17 14:04:41

Proteome Analysis of Corynebacterium diphtheriae–Macrophage Interaction

PROTEOMICS, EarlyView.

— Luca Musella, Jens Möller, Christopher Lischer, Julio Vera‐Gonzalez, Jörg Hofmann, Lisa Ott, Andreas Burkovski 2025-04-10 17:49:12

Comparative Analysis Between Olink‐PEA and Alamar‐NULISA Proteomic Technologies Applied to a Critically Ill COVID‐19 Cohort

PROTEOMICS, EarlyView.

— Sara Taleb, Nisha Stephan, Sareena Chennakkandathil, Muhammad Umar Sohail, Sondos Yousef, Hina Sarwath, Muna Al‐Noubi, Karsten Suhre, Ali Ait Hssain, Frank Schmidt 2025-02-10 19:05:32